Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815781.1_cds_XP_016498488.1_12512
CDS Infomation

[gene=LOC107817212] [db_xref=GeneID:107817212] [protein=protein trichome birefringence-like 5] [protein_id=XP_016498488.1] [location=complement(join(19910..20240,20505..20660,21080..21273,21547..21739,23355..24067))] [gbkey=CDS]
Sequence

ATGGCATCTTCTTCTTTACCTCCTAAGAAGAAAAACAACAACCGCTATACTCTTTCAACA
ATTTTCCTTCTCCTTTTGTTCCTCTCAAGTCTCTTCTATTTCAGCAAAAGAGCTCTTGAA
CCTAAACTTTCTCTCTACAGAGACGTCCTTTCTCAATCCCCTTCGCTATTTTCTCCAAGA
TCTGCTGATACTGAACTTCTTGATAATACACTAACAACTCCATTTGGTGATACCAAAGTC
CTAAAGACAAATATAAAGACACCTTTTACATCAAAATCTGAGACACCCCTTTTGTCAAAA
TCTGATTTTGACGATAGTTTGGATCAGAAAGTAACACCAATTTCATCAGAATCTAATGAT
ACTGAAGGCTTAAAAGCTTCTAAGAAAACACCCATTTCTGATTTCAATGATAATTTAGTT
GAGAAAAGCTCAGCACCTGTTTTATCAGAGTATAAGGAGGTATACAATGCAACAACAAAA
CGAGTGGTTGATTCTGCAAGAAATGAGGAGAAGTTGGTTGACTCTGATTTTAAAGTAGGA
GGACAAAGTTGTGATCTTTACAAGGGAAGATGGGTGAAAGATGAGAAGCACCCAATATAT
AAAGCAGGGTCTTGCCCTTATGTTGATGAGGCTTTTGATTGCCAGAGCAATGGTAGGCCT
GACTCGCAGTATCTTAATTGGAGATGGAAGCCACATGGATGTGATCTTCCTAGGTTTAGT
GCTACAAATTTTTTGAAGAGATTGAAAGGAAAGAGGCTGATGCTGGTTGGAGACTCTATG
AACCGGAACCAGTTTGAATCTCTCCTTTGCCTTCTTCGTGAAGGCCTTGTTAATAAGAGT
AAAATGTACGAGATCCATGGATATAAGATAACAAAAGGAAGAGGCTACTATGTTTTCAAA
TTTGAGGATTATAACTGCACAGTAGAATTCGTGCGCTCTCATTTCCTTGTTAGAGAAGGA
GTACGTATCAATGCTCAAGGGAACTCGAATCCAACTCTATCAATAGATCGCATCGACAAA
TCATCTAACCGTTGGAAGCAAGCTGACATTGTGGTCTTCAATACGGGCCATTGGTGGACA
CATGGAAAGACTGCCAGAGGGAAAAATTACTACAAAGAAAGTGATCATGTTTACCCTAAA
TTTGATGCCGTTGAAGCTTACAGGAGAGCATTGAAGACGTGGGCTAAGTGGATTGATGAA
AATATGAGTCATGAAAAGTTGATTATATATCGTGGTTACTCATCAGCTCACTACAGAGGC
GGAGATTGGGATTCGGGTGGCTCCTGTAATAAAGAGACTGAACCTGTTTCAACTGGGGCC
ATCCTTGGTAACTACCCTATGAAAATGAAGATTGTCGAGGAGGTAATCAACGAAATGCAG
CATCCCGTGGTCCTCTTGAATGTAACGAAGTTAACAAATTTCCGCAAGGATGGGCACCCA
TCAGTATATGGGAAGGTTGCTAGTGGTGGTAGAAAGGTGAAGCAAGATTGTAGCCACTGG
TGTCTTCCGGGGGTCCCTGATGCATGGAATGAGCTAATCTATGCCACTTTGGTCTTGCAA
CAACAATCTTGTGTCAACCAACAATAA

Peptide Sequence

PEP ID

XP_016498488.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 5 [Nicotiana tabacum]
Sequence

MASSSLPPKKKNNNRYTLSTIFLLLLFLSSLFYFSKRALEPKLSLYRDVLSQSPSLFSPR
SADTELLDNTLTTPFGDTKVLKTNIKTPFTSKSETPLLSKSDFDDSLDQKVTPISSESND
TEGLKASKKTPISDFNDNLVEKSSAPVLSEYKEVYNATTKRVVDSARNEEKLVDSDFKVG
GQSCDLYKGRWVKDEKHPIYKAGSCPYVDEAFDCQSNGRPDSQYLNWRWKPHGCDLPRFS
ATNFLKRLKGKRLMLVGDSMNRNQFESLLCLLREGLVNKSKMYEIHGYKITKGRGYYVFK
FEDYNCTVEFVRSHFLVREGVRINAQGNSNPTLSIDRIDKSSNRWKQADIVVFNTGHWWT
HGKTARGKNYYKESDHVYPKFDAVEAYRRALKTWAKWIDENMSHEKLIIYRGYSSAHYRG
GDWDSGGSCNKETEPVSTGAILGNYPMKMKIVEEVINEMQHPVVLLNVTKLTNFRKDGHP
SVYGKVASGGRKVKQDCSHWCLPGVPDAWNELIYATLVLQQQSCVNQQ

Transcript Sequence

Gene sequence data has not been registered.